STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH85263.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
CUH85882.1
Endonuclease/Exonuclease/phosphatase family protein.
  
     0.624
CUH84258.1
Hypothetical protein.
  
     0.486
CUH83337.1
Hypothetical protein.
  
     0.478
CUH85324.1
Hypothetical protein.
  
     0.477
CUH82991.1
Rhomboid family protein.
  
     0.453
CUH85394.1
Putative protein involved in outer membrane biogenesis.
  
     0.447
CUH82936.1
Hypothetical protein.
  
     0.444
CUH84625.1
Hypothetical protein.
  
     0.443
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
   0.439
CUH85494.1
RNA pyrophosphohydrolase.
  
     0.435
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.