STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yiaD_2Inner membrane lipoprotein YiaD precursor. (319 aa)    
Predicted Functional Partners:
CUH85272.1
Putative acetyltransferase.
 
 
   0.880
pncC_2
Nicotinamide-nucleotide amidohydrolase PncC.
    
  0.876
CUH85271.1
Putative peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.849
CUH84500.1
Flagellar motor protein MotD.
 
 0.791
sfsA
Sugar fermentation stimulation protein A; Belongs to the SfsA family.
       0.716
oprF_3
Root adhesin.
  
     0.705
oprF_1
Root adhesin.
  
     0.691
CUH84951.1
Outer membrane protein.
 
 
 0.629
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.627
CUH84080.1
Translocation protein TolB.
  
 0.627
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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