STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH85322.1CAAX amino terminal protease self-immunity. (300 aa)    
Predicted Functional Partners:
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
    0.735
fgs
Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
       0.731
CUH85323.1
Hypothetical protein.
 
     0.666
yadH
Inner membrane transport permease YadH.
  
  
 0.581
drrA
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
 
 0.521
mexA
Multidrug resistance protein MexA precursor.
  
    0.468
CUH85161.1
Hypothetical protein.
  
     0.442
ttgE
Toluene efflux pump membrane transporter TtgE.
  
     0.437
CUH85324.1
Hypothetical protein.
       0.425
CUH83209.1
Hypothetical protein.
  
     0.423
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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