Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH85152.1 | bcp | TM5383_02380 | TM5383_02626 | Alkyl hydroperoxide reductase subunit C. | Putative peroxiredoxin bcp. | 0.525 |
CUH85390.1 | CUH85391.1 | TM5383_02623 | TM5383_02624 | Putative acyltransferase. | Glycyl-glycine endopeptidase ALE-1 precursor. | 0.883 |
CUH85390.1 | CUH85392.1 | TM5383_02623 | TM5383_02625 | Putative acyltransferase. | Hypothetical protein. | 0.622 |
CUH85390.1 | CUH85394.1 | TM5383_02623 | TM5383_02627 | Putative acyltransferase. | Putative protein involved in outer membrane biogenesis. | 0.401 |
CUH85390.1 | bcp | TM5383_02623 | TM5383_02626 | Putative acyltransferase. | Putative peroxiredoxin bcp. | 0.607 |
CUH85391.1 | CUH85390.1 | TM5383_02624 | TM5383_02623 | Glycyl-glycine endopeptidase ALE-1 precursor. | Putative acyltransferase. | 0.883 |
CUH85391.1 | CUH85392.1 | TM5383_02624 | TM5383_02625 | Glycyl-glycine endopeptidase ALE-1 precursor. | Hypothetical protein. | 0.524 |
CUH85391.1 | CUH85394.1 | TM5383_02624 | TM5383_02627 | Glycyl-glycine endopeptidase ALE-1 precursor. | Putative protein involved in outer membrane biogenesis. | 0.479 |
CUH85391.1 | bcp | TM5383_02624 | TM5383_02626 | Glycyl-glycine endopeptidase ALE-1 precursor. | Putative peroxiredoxin bcp. | 0.489 |
CUH85392.1 | CUH85390.1 | TM5383_02625 | TM5383_02623 | Hypothetical protein. | Putative acyltransferase. | 0.622 |
CUH85392.1 | CUH85391.1 | TM5383_02625 | TM5383_02624 | Hypothetical protein. | Glycyl-glycine endopeptidase ALE-1 precursor. | 0.524 |
CUH85392.1 | CUH85394.1 | TM5383_02625 | TM5383_02627 | Hypothetical protein. | Putative protein involved in outer membrane biogenesis. | 0.613 |
CUH85392.1 | bcp | TM5383_02625 | TM5383_02626 | Hypothetical protein. | Putative peroxiredoxin bcp. | 0.771 |
CUH85392.1 | queA | TM5383_02625 | TM5383_02628 | Hypothetical protein. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.552 |
CUH85394.1 | CUH85390.1 | TM5383_02627 | TM5383_02623 | Putative protein involved in outer membrane biogenesis. | Putative acyltransferase. | 0.401 |
CUH85394.1 | CUH85391.1 | TM5383_02627 | TM5383_02624 | Putative protein involved in outer membrane biogenesis. | Glycyl-glycine endopeptidase ALE-1 precursor. | 0.479 |
CUH85394.1 | CUH85392.1 | TM5383_02627 | TM5383_02625 | Putative protein involved in outer membrane biogenesis. | Hypothetical protein. | 0.613 |
CUH85394.1 | bcp | TM5383_02627 | TM5383_02626 | Putative protein involved in outer membrane biogenesis. | Putative peroxiredoxin bcp. | 0.653 |
CUH85394.1 | queA | TM5383_02627 | TM5383_02628 | Putative protein involved in outer membrane biogenesis. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.750 |
bcp | CUH85152.1 | TM5383_02626 | TM5383_02380 | Putative peroxiredoxin bcp. | Alkyl hydroperoxide reductase subunit C. | 0.525 |
page 1 of 2