STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH85420.1Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. (390 aa)    
Predicted Functional Partners:
lptB_6
Lipopolysaccharide export system ATP-binding protein LptB.
 
 0.998
livH_7
LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
livF_7
LIV-I protein F.
 
  0.979
amiC_2
Aliphatic amidase expression-regulating protein.
 
 
 0.977
braC_3
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor.
  
 
 0.858
livH_4
LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family.
 
 0.765
livF_4
LIV-I protein F.
 
  0.693
lptB_2
Lipopolysaccharide export system ATP-binding protein LptB.
 
  0.689
livF_3
LIV-I protein F.
 
  0.689
livF_1
LIV-I protein F.
 
  0.679
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.