STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH85594.1Hypothetical protein. (596 aa)    
Predicted Functional Partners:
CUH85593.1
Hypothetical protein.
 
    
0.849
CUH83477.1
Hypothetical protein.
  
     0.747
CUH83669.1
Hypothetical protein.
  
     0.737
CUH85623.1
Hypothetical protein.
  
     0.734
CUH85323.1
Hypothetical protein.
  
     0.716
CUH84451.1
Hypothetical protein.
  
     0.701
CUH85568.1
Hypothetical protein.
 
 
  0.696
CUH83046.1
Hypothetical protein.
 
 
  0.682
gspA
General stress protein A.
       0.670
CUH85566.1
Hypothetical protein.
 
 
  0.660
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.