STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH85718.1Hypothetical protein. (117 aa)    
Predicted Functional Partners:
CUH84477.1
Hypothetical protein.
  
     0.647
CUH82973.1
Transglycosylase SLT domain protein.
  
     0.552
CUH83979.1
Hypothetical protein.
  
     0.540
ylxH
Flagellum site-determining protein YlxH; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.536
CUH84317.1
Core-2/I-Branching enzyme.
  
     0.500
CUH82922.1
Hypothetical protein.
  
     0.484
CUH82936.1
Hypothetical protein.
  
     0.474
CUH84685.1
Hypothetical protein.
  
     0.467
CUH84930.1
Legume lectin domain protein.
  
     0.418
Your Current Organism:
Thalassobius mediterraneus
NCBI taxonomy Id: 340021
Other names: CCUG 49438, CECT 5383, CIP 108400, DSM 16398, T. mediterraneus, Thalassobius mediterraneus Arahal et al. 2005, strain XSM19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.