STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PapDFimbrial chaperone protein. (237 aa)    
Predicted Functional Partners:
PapC
Outer membrane usher protein.
 
 
 0.996
SFH40675.1
Spore coat protein U (SCPU) domain-containing protein.
 
 
 0.972
SFH40726.1
Spore coat protein U (SCPU) domain-containing protein.
 
 
 0.969
SFH18050.1
Hemolysin-type calcium-binding repeat-containing protein.
   
    0.507
Your Current Organism:
Paracoccus aminovorans
NCBI taxonomy Id: 34004
Other names: ATCC 49632, CIP 106076, DSM 8537, IFO 16711, JCM 7685, NBRC 16711, P. aminovorans, Paracoccus aminivorans, VKM B-2140, strain DM-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.