STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH75970.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
SFH75987.1
Hypothetical protein.
 
     0.949
SFH76005.1
Hypothetical protein.
 
     0.931
SFH75931.1
Phage tail tape measure protein, lambda family.
 
     0.908
SFH75953.1
Hypothetical protein.
 
     0.905
SFH83643.1
Hypothetical protein.
 
     0.798
SFH92426.1
Hypothetical protein.
 
     0.798
SFH83715.1
Hypothetical protein.
 
     0.790
SFH92474.1
Hypothetical protein.
 
     0.790
SFH76042.1
Hypothetical protein.
 
     0.782
SFH76061.1
Hypothetical protein.
 
     0.782
Your Current Organism:
Paracoccus aminovorans
NCBI taxonomy Id: 34004
Other names: ATCC 49632, CIP 106076, DSM 8537, IFO 16711, JCM 7685, NBRC 16711, P. aminovorans, Paracoccus aminivorans, VKM B-2140, strain DM-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.