STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH94731.1Hemoglobin/transferrin/lactoferrin receptor protein. (678 aa)    
Predicted Functional Partners:
SFH38284.1
Cell division and transport-associated protein TolA (TC 2.C.1.2.1).
 
 
 0.591
SFH37869.1
Protein TonB.
 
 
 0.573
EntF3
Enterobactin synthetase component F.
 
  
 0.485
SFH94677.1
Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
     
 0.483
SFH21160.1
Hypothetical protein.
 
     0.462
SFH37795.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
 
  
 0.457
SFH94705.1
Ribonuclease D.
       0.447
SFH94650.1
Lipopolysaccharide export system protein LptC.
       0.445
SFH47502.1
Iron complex transport system substrate-binding protein.
 
  
 0.431
SFH70824.1
Aryl carrier domain-containing protein.
 
  
 0.416
Your Current Organism:
Paracoccus aminovorans
NCBI taxonomy Id: 34004
Other names: ATCC 49632, CIP 106076, DSM 8537, IFO 16711, JCM 7685, NBRC 16711, P. aminovorans, Paracoccus aminivorans, VKM B-2140, strain DM-82
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