STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI06037.1Putative phage cell wall peptidase, NlpC/P60 family. (167 aa)    
Predicted Functional Partners:
SFI06012.1
Putative phage tail protein.
 
     0.948
SFI06053.1
Phage conserved hypothetical protein BR0599.
 
     0.948
SFI06076.1
TIGR02217 family protein.
 
     0.948
SFI05990.1
Protein of unknown function.
 
  
 0.921
SFI06099.1
Phage tail tape measure protein, lambda family.
 
    0.848
SFH10168.1
Phage portal protein, HK97 family.
 
    0.797
SFH10356.1
Phage tail tape measure protein, lambda family.
 
  
 0.795
SFH10302.1
Phage major tail protein, TP901-1 family.
 
     0.787
SFH84639.1
Putative phage tail protein.
 
     0.782
SFH10320.1
Phage tail tube protein, GTA-gp10.
 
    0.781
Your Current Organism:
Paracoccus aminovorans
NCBI taxonomy Id: 34004
Other names: ATCC 49632, CIP 106076, DSM 8537, IFO 16711, JCM 7685, NBRC 16711, P. aminovorans, Paracoccus aminivorans, VKM B-2140, strain DM-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.