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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABY93858.1PFAM: Propeptide, PepSY amd peptidase M4. (444 aa)    
Predicted Functional Partners:
ABY93857.1
Cell wall hydrolase, SleB; PFAM: Peptidoglycan-binding domain 1 protein; cell wall hydrolase, SleB.
 
  
 0.981
ABY93855.1
PFAM: spore germination B3 GerAC family protein.
 
   
 0.856
ABY93854.1
TIGRFAM: spore germination protein; PFAM: Spore germination protein.
 
   
 0.831
ABY93853.1
PFAM: GerA spore germination protein.
 
    0.808
ABY95157.1
PFAM: Peptidoglycan-binding LysM; cell wall hydrolase, SleB.
 
  
 0.779
ABY93859.1
Hypothetical protein.
 
   
 0.774
ABY93856.1
Hypothetical protein.
 
   
 0.760
ABY93981.1
PFAM: spore germination B3 GerAC family protein.
 
   
 0.755
ABY94477.1
Peptidase U4, sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
   
 0.708
ABY93979.1
TIGRFAM: spore germination protein; PFAM: Spore germination protein.
 
   
 0.704
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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