STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY93931.1PFAM: binding-protein-dependent transport systems inner membrane component. (315 aa)    
Predicted Functional Partners:
ABY93932.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.969
ABY93930.1
PFAM: extracellular solute-binding protein, family 1.
 
 0.939
ABY94334.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.922
ABY94225.1
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.
 
 
 0.919
ABY94273.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.889
ABY94279.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.889
ABY95165.1
Monosaccharide-transporting ATPase; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.889
ABY95680.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.889
ABY95161.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.886
ABY94277.1
PFAM: extracellular solute-binding protein, family 1.
   0.872
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.