Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABY94096.1PFAM: Desulfoferrodoxin, ferrous iron-binding region. (124 aa)    
Predicted Functional Partners:
ABY94095.1
PFAM: Rubrerythrin; Ferritin, Dps family protein.
       0.718
ABY93906.1
Ferritin, Dps family protein; Iron-storage protein.
  
    0.633
ABY94163.1
PFAM: Rubredoxin-type Fe(Cys)4 protein.
  
  
 0.588
ABY94627.1
PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase.
 
  
 0.581
ABY93787.1
TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin.
 
   
 0.502
ABY95428.1
PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein.
 
  
 0.480
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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