Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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ABY94335.1Alpha amylase, catalytic region; PFAM: glycoside hydrolase, starch-binding; cell surface receptor IPT/TIG domain protein; alpha amylase, catalytic region; SMART: alpha amylase, C-terminal all-beta; alpha amylase, catalytic sub domain; Belongs to the glycosyl hydrolase 13 family. (757 aa)    
Predicted Functional Partners:
ABY94357.1
TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35.
 
 
 0.938
ABY94331.1
PFAM: alpha amylase, catalytic region; alpha amylase, C-terminal all-beta; SMART: alpha amylase, catalytic sub domain.
 
  
 
0.936
ABY94339.1
Alpha amylase, catalytic region; Hydrolyzes cyclodextrins. Can also act on linear maltodextrins, with the exception of maltose; Belongs to the glycosyl hydrolase 13 family.
  
  
 
0.929
ABY94332.1
PFAM: extracellular solute-binding protein, family 1.
 
  
 0.786
ABY94334.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
  
 0.742
ABY95459.1
TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC.
  
  
 0.710
ABY95628.1
Hypothetical protein.
 
 
 0.682
ABY95477.1
Amino acid transporter-like protein.
   
 0.642
ABY94333.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
  
 0.641
ABY95164.1
Beta-phosphoglucomutase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase.
 
  
 0.640
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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