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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsLCell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. (147 aa)    
Predicted Functional Partners:
ABY94472.1
Polypeptide-transport-associated domain protein, FtsQ-type; Essential cell division protein.
  
 
 0.941
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
  
 0.939
mraZ
TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; Belongs to the MraZ family.
  
  
 0.856
ABY93926.1
PFAM: Septum formation initiator.
    
 
 0.819
ABY94464.1
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA domain containing protein.
  
 
 0.762
ABY94666.1
Hypothetical protein.
  
     0.718
ABY95422.1
Hypothetical protein.
  
     0.683
ABY95149.1
Hypothetical protein.
  
     0.642
ABY94674.1
Hypothetical protein.
  
     0.617
ABY94441.1
Hypothetical protein.
  
     0.612
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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