Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY94500.1 | ABY94501.1 | Teth39_0843 | Teth39_0844 | Hypothetical protein. | PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component. | 0.563 |
ABY94500.1 | ABY94502.1 | Teth39_0843 | Teth39_0845 | Hypothetical protein. | TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; 2-hydroxyglutaryl-CoA dehydratase, D-component. | 0.514 |
ABY94500.1 | ABY94503.1 | Teth39_0843 | Teth39_0846 | Hypothetical protein. | Transcriptional regulator, CdaR; PFAM: sugar diacid recognition domain protein. | 0.435 |
ABY94501.1 | ABY94500.1 | Teth39_0844 | Teth39_0843 | PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component. | Hypothetical protein. | 0.563 |
ABY94501.1 | ABY94502.1 | Teth39_0844 | Teth39_0845 | PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component. | TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; 2-hydroxyglutaryl-CoA dehydratase, D-component. | 0.981 |
ABY94501.1 | ABY94503.1 | Teth39_0844 | Teth39_0846 | PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component. | Transcriptional regulator, CdaR; PFAM: sugar diacid recognition domain protein. | 0.582 |
ABY94502.1 | ABY94500.1 | Teth39_0845 | Teth39_0843 | TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; 2-hydroxyglutaryl-CoA dehydratase, D-component. | Hypothetical protein. | 0.514 |
ABY94502.1 | ABY94501.1 | Teth39_0845 | Teth39_0844 | TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; 2-hydroxyglutaryl-CoA dehydratase, D-component. | PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component. | 0.981 |
ABY94502.1 | ABY94503.1 | Teth39_0845 | Teth39_0846 | TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; 2-hydroxyglutaryl-CoA dehydratase, D-component. | Transcriptional regulator, CdaR; PFAM: sugar diacid recognition domain protein. | 0.639 |
ABY94503.1 | ABY94500.1 | Teth39_0846 | Teth39_0843 | Transcriptional regulator, CdaR; PFAM: sugar diacid recognition domain protein. | Hypothetical protein. | 0.435 |
ABY94503.1 | ABY94501.1 | Teth39_0846 | Teth39_0844 | Transcriptional regulator, CdaR; PFAM: sugar diacid recognition domain protein. | PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component. | 0.582 |
ABY94503.1 | ABY94502.1 | Teth39_0846 | Teth39_0845 | Transcriptional regulator, CdaR; PFAM: sugar diacid recognition domain protein. | TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; 2-hydroxyglutaryl-CoA dehydratase, D-component. | 0.639 |