STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY94578.1PFAM: protein of unknown function DUF324. (724 aa)    
Predicted Functional Partners:
ABY94576.1
PFAM: protein of unknown function DUF324.
 
     0.951
ABY94574.1
Hypothetical protein.
 
   
 0.949
ABY94575.1
PFAM: protein of unknown function DUF324.
 
     0.946
ABY94573.1
Hypothetical protein.
       0.780
ABY94577.1
Hypothetical protein.
       0.769
ABY93795.1
TIGRFAM: CRISPR-associated protein, TM1802 family; CRISPR-associated protein, Csh1 family.
  
     0.646
ABY95858.1
Hypothetical protein.
  
   0.645
ABY94572.1
TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif.
 
     0.630
ABY94571.1
Hypothetical protein.
 
     0.626
ABY95707.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.584
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.