STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY94588.1Hypothetical protein. (112 aa)    
Predicted Functional Partners:
ABY94586.1
PFAM: ATPase associated with various cellular activities, AAA_5.
     0.983
ABY94589.1
Hypothetical protein.
 
     0.952
ABY94211.1
Hypothetical protein.
 
     0.739
ABY94590.1
PFAM: transposase, IS4 family protein.
       0.511
ABY95804.1
PFAM: glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.499
ABY94905.1
PFAM: flagellar hook-length control protein.
  
     0.490
ABY94365.1
Hypothetical protein.
  
     0.468
ABY95707.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.461
ABY94587.1
PFAM: Integrase, catalytic region.
       0.430
ABY93715.1
Hypothetical protein.
  
     0.424
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.