STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY94655.1TIGRFAM: SpoIID/LytB domain; PFAM: Peptidoglycan-binding domain 1 protein; Stage II sporulation D domain protein. (762 aa)    
Predicted Functional Partners:
ABY94367.1
Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
     0.558
ABY94113.1
PFAM: Peptidoglycan-binding domain 1 protein; Peptidoglycan-binding LysM.
  
  
 0.552
ABY95499.1
Conserved hypothetical protein.
  
     0.550
ABY95850.1
PFAM: peptidase M23B; Lytic transglycosylase, catalytic.
 
  
 0.535
hflX
Small GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.486
ABY94082.1
PFAM: protein of unknown function DUF990.
  
     0.483
ABY94083.1
PFAM: protein of unknown function DUF990.
  
    0.474
ABY94080.1
PFAM: helix-turn-helix domain protein; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
 
     0.462
ABY95157.1
PFAM: Peptidoglycan-binding LysM; cell wall hydrolase, SleB.
  
  
 0.459
ABY95451.1
Hypothetical protein.
  
     0.453
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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