Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY94731.1 | ABY94732.1 | Teth39_1076 | Teth39_1077 | Hypothetical protein. | Tfp pilus assembly protein ATPase PilM-like protein. | 0.814 |
ABY94731.1 | ABY94734.1 | Teth39_1076 | Teth39_1079 | Hypothetical protein. | Hypothetical protein. | 0.803 |
ABY94731.1 | ABY94736.1 | Teth39_1076 | Teth39_1081 | Hypothetical protein. | PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease, family 2. | 0.759 |
ABY94731.1 | ABY94740.1 | Teth39_1076 | Teth39_1085 | Hypothetical protein. | Peptidase M24; PFAM: creatinase; peptidase M24. | 0.702 |
ABY94731.1 | aroK | Teth39_1076 | Teth39_1080 | Hypothetical protein. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.780 |
ABY94731.1 | aroQ | Teth39_1076 | Teth39_1084 | Hypothetical protein. | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.701 |
ABY94731.1 | efp | Teth39_1076 | Teth39_1086 | Hypothetical protein. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.671 |
ABY94731.1 | proA | Teth39_1076 | Teth39_1083 | Hypothetical protein. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.737 |
ABY94731.1 | proB | Teth39_1076 | Teth39_1082 | Hypothetical protein. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.738 |
ABY94732.1 | ABY94731.1 | Teth39_1077 | Teth39_1076 | Tfp pilus assembly protein ATPase PilM-like protein. | Hypothetical protein. | 0.814 |
ABY94732.1 | ABY94734.1 | Teth39_1077 | Teth39_1079 | Tfp pilus assembly protein ATPase PilM-like protein. | Hypothetical protein. | 0.957 |
ABY94732.1 | ABY94736.1 | Teth39_1077 | Teth39_1081 | Tfp pilus assembly protein ATPase PilM-like protein. | PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease, family 2. | 0.771 |
ABY94732.1 | ABY94740.1 | Teth39_1077 | Teth39_1085 | Tfp pilus assembly protein ATPase PilM-like protein. | Peptidase M24; PFAM: creatinase; peptidase M24. | 0.713 |
ABY94732.1 | aroK | Teth39_1077 | Teth39_1080 | Tfp pilus assembly protein ATPase PilM-like protein. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.793 |
ABY94732.1 | aroQ | Teth39_1077 | Teth39_1084 | Tfp pilus assembly protein ATPase PilM-like protein. | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.718 |
ABY94732.1 | efp | Teth39_1077 | Teth39_1086 | Tfp pilus assembly protein ATPase PilM-like protein. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.679 |
ABY94732.1 | proA | Teth39_1077 | Teth39_1083 | Tfp pilus assembly protein ATPase PilM-like protein. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.752 |
ABY94732.1 | proB | Teth39_1077 | Teth39_1082 | Tfp pilus assembly protein ATPase PilM-like protein. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.753 |
ABY94734.1 | ABY94731.1 | Teth39_1079 | Teth39_1076 | Hypothetical protein. | Hypothetical protein. | 0.803 |
ABY94734.1 | ABY94732.1 | Teth39_1079 | Teth39_1077 | Hypothetical protein. | Tfp pilus assembly protein ATPase PilM-like protein. | 0.957 |
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