Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABY94766.1Hypothetical protein. (308 aa)    
Predicted Functional Partners:
ABY94765.1
PFAM: Thiamin pyrophosphokinase, catalytic region.
 
  
 0.981
ABY94767.1
PFAM: glycosyl transferase, family 2.
 
     0.955
ABY94769.1
Hypothetical protein.
 
     0.954
ABY94768.1
Hypothetical protein.
 
     0.952
ABY95051.1
Hypothetical protein.
 
     0.788
ABY95119.1
PFAM: NLP/P60 protein; SH3 domain protein; protein of unknown function DUF1058; Variant SH3 domain protein; SH3, type 3 domain protein; SMART: SH3 domain protein domain protein.
  
 
 0.724
ABY93877.1
PFAM: NLP/P60 protein.
   
 
 0.680
ABY94657.1
Hypothetical protein.
  
     0.630
ABY94666.1
Hypothetical protein.
  
     0.573
ABY93775.1
Hypothetical protein.
  
     0.550
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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