Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABY94881.1PFAM: protein of unknown function DUF342. (454 aa)    
Predicted Functional Partners:
ABY94888.1
PFAM: type IV pilus assembly PilZ.
 
    0.884
ABY94899.1
PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM.
 
     0.879
ABY94884.1
CheC, inhibitor of MCP methylation; PFAM: CheC domain protein.
 
    0.876
ABY94890.1
PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase.
 
   
 0.854
ABY94901.1
PFAM: flagellar FlbD family protein.
 
   
 0.851
ABY94882.1
TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2.
 
     0.845
cheD
CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
     0.839
ABY94898.1
CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein.
 
    0.822
ABY94889.1
PFAM: Cobyrinic acid a,c-diamide synthase.
 
     0.812
ABY94906.1
Hypothetical protein.
 
     0.807
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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