Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY93757.1 | ABY95309.1 | Teth39_0084 | Teth39_1670 | Hypothetical protein. | TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system. | 0.433 |
ABY95131.1 | ABY95309.1 | Teth39_1481 | Teth39_1670 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system. | 0.450 |
ABY95226.1 | ABY95309.1 | Teth39_1582 | Teth39_1670 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system. | 0.514 |
ABY95309.1 | ABY93757.1 | Teth39_1670 | Teth39_0084 | TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system. | Hypothetical protein. | 0.433 |
ABY95309.1 | ABY95131.1 | Teth39_1670 | Teth39_1481 | TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.450 |
ABY95309.1 | ABY95226.1 | Teth39_1670 | Teth39_1582 | TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.514 |
ABY95309.1 | ABY95310.1 | Teth39_1670 | Teth39_1671 | TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system. | Hypothetical protein. | 0.773 |
ABY95310.1 | ABY95309.1 | Teth39_1671 | Teth39_1670 | Hypothetical protein. | TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system. | 0.773 |