Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABY95581.1Hypothetical protein. (267 aa)    
Predicted Functional Partners:
ABY93922.1
Hypothetical protein.
  
     0.677
ABY93717.1
PFAM: StbA family protein.
  
     0.645
ABY93751.1
Hypothetical protein.
  
     0.629
ABY93762.1
Hypothetical protein.
  
     0.603
apu
Alpha amylase, catalytic region; PFAM: Fibronectin, type III domain protein; glycoside hydrolase, family 13 domain protein Ig domain protein region domain protein; alpha amylase, catalytic region; protein of unknown function DUF1058; SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; alpha amylase, C-terminal all-beta; alpha amylase, catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
  
     0.599
ABY93744.1
Hypothetical protein.
  
     0.563
ABY95839.1
Hypothetical protein.
  
     0.563
ABY94564.1
Hypothetical protein.
  
     0.538
ABY95580.1
PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
 
     0.537
ABY95431.1
Hypothetical protein.
  
     0.523
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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