STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY95608.1PFAM: putative sugar-specific permease, SgaT/UlaA. (424 aa)    
Predicted Functional Partners:
ABY95607.1
PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit.
 
 
 0.997
ABY95609.1
Transcriptional antiterminator, BglG; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; M trans-acting positive regulator; PRD domain protein; Helix-turn-helix, type 11 domain protein.
 
  
 0.931
ABY95606.1
Hypothetical protein; Belongs to the UPF0309 family.
 
     0.925
ABY94342.1
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein.
    
 0.902
ABY95703.1
Response regulator receiver protein; PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit.
 
  
 0.781
ABY94000.1
Transcriptional antiterminator, BglG; PFAM: regulatory protein, DeoR; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; M trans-acting positive regulator; PRD domain protein; Helix-turn-helix, type 11 domain protein.
 
  
 0.751
ABY95459.1
TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC.
 
  
 0.730
ABY95339.1
Transcriptional antiterminator, BglG; PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; PRD domain protein; Helix-turn-helix, type 11 domain protein.
 
  
 0.699
hisI
PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; In the N-terminal section; belongs to the PRA-CH family.
   
    0.686
ABY95704.1
Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
  
 0.663
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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