STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY95609.1Transcriptional antiterminator, BglG; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; M trans-acting positive regulator; PRD domain protein; Helix-turn-helix, type 11 domain protein. (705 aa)    
Predicted Functional Partners:
ABY95608.1
PFAM: putative sugar-specific permease, SgaT/UlaA.
 
  
 0.919
ABY95607.1
PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit.
 
  
 0.913
ABY95705.1
PTS system transcriptional activator; PFAM: sigma-54 factor, interaction domain-containing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
 
  
 0.847
ABY95573.1
TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit.
 
  
 0.841
ABY95459.1
TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC.
 
 
 0.836
ABY95606.1
Hypothetical protein; Belongs to the UPF0309 family.
 
     0.792
ABY95703.1
Response regulator receiver protein; PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit.
 
  
 0.780
ABY93826.1
TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit.
  
  
 0.770
ABY94002.1
TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system, EIIC.
  
  
 0.770
ABY94003.1
TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS, fructose-specific IIB subunit.
  
  
 0.770
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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