STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY95628.1Hypothetical protein. (525 aa)    
Predicted Functional Partners:
ABY95627.1
TIGRFAM: glycogen synthase; PFAM: glycosyl transferase, group 1.
 
  
 0.990
ABY94339.1
Alpha amylase, catalytic region; Hydrolyzes cyclodextrins. Can also act on linear maltodextrins, with the exception of maltose; Belongs to the glycosyl hydrolase 13 family.
 0.977
ABY93679.1
Alpha-glucosidase; PFAM: glycoside hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family.
 
  
  0.916
ABY94331.1
PFAM: alpha amylase, catalytic region; alpha amylase, C-terminal all-beta; SMART: alpha amylase, catalytic sub domain.
 
 
 0.718
ABY95629.1
TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: histidine triad (HIT) protein; galactose-1-phosphate uridyl transferase domain protein.
       0.714
ABY94335.1
Alpha amylase, catalytic region; PFAM: glycoside hydrolase, starch-binding; cell surface receptor IPT/TIG domain protein; alpha amylase, catalytic region; SMART: alpha amylase, C-terminal all-beta; alpha amylase, catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.673
ABY95626.1
Hypothetical protein.
 
     0.611
apu
Alpha amylase, catalytic region; PFAM: Fibronectin, type III domain protein; glycoside hydrolase, family 13 domain protein Ig domain protein region domain protein; alpha amylase, catalytic region; protein of unknown function DUF1058; SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; alpha amylase, C-terminal all-beta; alpha amylase, catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.577
ABY94357.1
TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35.
 
  
 0.501
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.