Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABY95695.1PFAM: sigma-54 factor, interaction domain-containing protein; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase. (915 aa)    
Predicted Functional Partners:
ABY94389.1
TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein.
 
 
 
 0.884
ABY95694.1
PFAM: PTS system fructose subfamily IIA component.
 
  
 0.838
ABY95693.1
PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit.
 
  
 0.801
ABY95692.1
PFAM: PTS system mannose/fructose/sorbose family IID component.
 
  
 0.788
ABY95691.1
PFAM: PTS system sorbose subfamily IIB component.
 
   
 0.758
ABY95576.1
PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit.
 
   
 0.727
ABY94441.1
Hypothetical protein.
   
 
 0.715
ABY95579.1
PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
     0.713
ABY95577.1
PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit.
 
     0.710
ABY95334.1
PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit.
 
   
 0.676
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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