Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABY95796.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
ABY95797.1
PFAM: short-chain dehydrogenase/reductase SDR.
  
    0.608
ABY95431.1
Hypothetical protein.
  
     0.587
ABY94441.1
Hypothetical protein.
  
     0.529
ABY94734.1
Hypothetical protein.
  
     0.527
ABY95569.1
5'-nucleotidase., 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; protein of unknown function DUF1058; SH3, type 3 domain protein; SMART: SH3 domain protein domain protein.
  
     0.517
ABY93867.1
PFAM: ABC-2 type transporter.
 
     0.480
ABY94191.1
PFAM: LmbE family protein.
  
     0.456
ABY95825.1
PFAM: lipolytic enzyme, G-D-S-L family.
  
    0.445
ABY95136.1
Hypothetical protein.
  
     0.440
ABY94733.1
PFAM: Fimbrial assembly family protein.
  
     0.437
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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