STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY95799.1Hypothetical protein. (349 aa)    
Predicted Functional Partners:
ABY95800.1
PFAM: glycosyl transferase, group 1.
    0.994
ABY95802.1
PFAM: glycosidase, PH1107-related; Glycosyl hydrolase family 32, N terminal domain protein.
 
     0.855
ABY95803.1
PFAM: glycosidase, PH1107-related.
 
     0.852
ABY93933.1
Dextranase.
   
 
 0.732
ABY95212.1
Hypothetical protein.
    
 
 0.707
ABY95253.1
Hypothetical protein.
    
 
 0.707
ABY95481.1
Hypothetical protein.
    
 
 0.707
ABY95852.1
Hypothetical protein.
    
 
 0.707
ABY95801.1
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase.
       0.682
ABY95798.1
D-alanine--D-alanine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp.
       0.613
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.