STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pars_0126PFAM: Methyltransferase type 11; KEGG: pis:Pisl_1163 methyltransferase type 11. (159 aa)    
Predicted Functional Partners:
Pars_0127
KEGG: pai:PAE0931 hypothetical protein.
       0.714
Pars_0128
Hypothetical protein.
       0.714
rps24e
PFAM: Ribosomal protein S24e; KEGG: pis:Pisl_1895 transcriptional regulator, fis family; Belongs to the eukaryotic ribosomal protein eS24 family.
 
  0.704
rps5
SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy.
    
 0.669
rps6e
PFAM: ribosomal protein S6e; KEGG: pai:PAE1505 ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
  0.651
Pars_1982
KEGG: pai:PAE1636 hypothetical protein.
  
     0.650
Pars_0123
KEGG: pai:PAE0923 hypothetical protein.
       0.628
Pars_0124
KEGG: pai:PAE0924 hypothetical protein.
       0.628
Pars_0125
KEGG: pai:PAE0925 hypothetical protein.
       0.628
Pars_0122
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pai:PAE0922 histone acetyltransferase, ELP3 family.
  
 
 0.606
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.