STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pars_0200PFAM: major facilitator superfamily MFS_1; KEGG: pai:PAE1049 hypothetical protein. (405 aa)    
Predicted Functional Partners:
Pars_0199
PFAM: glycoside hydrolase, family 57; KEGG: pai:PAE1048 hypothetical protein.
       0.728
Pars_0201
KEGG: pai:PAE1054 hypothetical protein.
       0.686
Pars_0936
PFAM: Polysulphide reductase, NrfD; KEGG: pai:PAE2861 molybdopterin oxidoreductase, membrane subunit.
 
     0.634
Pars_0954
Formate dehydrogenase alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pai:PAE2662 formate dehydrogenase alpha subunit.
 
   
 0.628
Pars_2355
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: pai:PAE0712 surface layer-associated stable protease, conjectural; Belongs to the peptidase S8 family.
  
  
 0.596
Pars_1888
PFAM: Abortive infection protein; KEGG: tpe:Tpen_1351 abortive infection protein.
 
    0.557
Pars_0212
KEGG: pai:PAE1173 hypothetical protein.
 
     0.555
Pars_1408
paREP7; KEGG: pai:PAE2493 paREP7.
  
     0.552
Pars_1982
KEGG: pai:PAE1636 hypothetical protein.
  
     0.549
Pars_1148
KEGG: tpe:Tpen_1705 hypothetical protein.
  
     0.522
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.