STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pars_0362PFAM: glycosyl transferase, family 2; KEGG: pai:PAE0419 glycosyl transferase, putative. (364 aa)    
Predicted Functional Partners:
Pars_0361
PFAM: glycosyl transferase, group 1; KEGG: pai:PAE0430 glycosyltransferase (type 1).
 
   
 0.665
Pars_0997
PFAM: Creatininase; KEGG: tpe:Tpen_1805 creatininase.
  
  
 0.543
Pars_1350
PFAM: Creatininase; KEGG: pai:PAE2983 hypothetical protein.
  
  
 0.543
Pars_2113
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pai:PAE1922 UDP-glucose 4-epimerase.
 
 
 0.474
Pars_0363
PFAM: PaREP1 domain containing protein; KEGG: pai:PAE0422 paREP1.
       0.471
Pars_0340
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pab:PAB2145 UDP-glucose 4-epimerase.
 
 
 0.459
Pars_1059
PFAM: protein of unknown function DUF214; KEGG: pai:PAE3663 hypothetical protein.
 
   
 0.449
Pars_1073
PFAM: protein of unknown function DUF214; KEGG: pai:PAE3663 hypothetical protein.
 
   
 0.424
Pars_0025
Alpha-phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: pai:PAE0764 phosphomannomutase (pmm); Belongs to the phosphohexose mutase family.
 
 
 0.418
Pars_1581
PFAM: protein of unknown function DUF214; KEGG: pai:PAE2288 putative ABC transporter permease protein.
 
   
 0.406
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.