STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pars_0389Tetrathionate reductase alpha subunit precursor; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pai:PAE1265 molybdopterin oxidoreductase, molybdopterin binding subunit. (1173 aa)    
Predicted Functional Partners:
Pars_0387
Tetrathionate reductase beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: pai:PAE1263 molybdopterin oxidoreductase, iron-sulfur binding subunit.
 
 0.969
Pars_0924
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: pai:PAE2837 molybdopterin oxidoreductase, iron-sulfur binding subunit.
 
 
 0.829
Pars_0937
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: pai:PAE2860 molybdopterin oxidoreductase, iron-sulfur binding subunit.
 
 
 0.829
Pars_0953
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: pai:PAE2661 formate dehydrogenase beta subunit.
 
 
 0.793
Pars_0388
KEGG: pai:PAE1264 hypothetical protein.
     
 0.788
Pars_0498
TIGRFAM: nitrate reductase, beta subunit; KEGG: pai:PAE3612 nitrate reductase beta subunit.
   
 
 0.612
Pars_2368
Molybdopterin synthase subunit MoaE / molybdopterin synthase subunit MoaD; TIGRFAM: MoaD family protein; PFAM: molybdopterin biosynthesis MoaE; thiamineS protein; KEGG: pai:PAE0727 molybdenum cofactor biosynthesis protein D/E.
     
 0.524
Pars_0385
KEGG: pai:PAE1260 hypothetical protein.
       0.502
Pars_0386
KEGG: pai:PAE1261 hypothetical protein.
       0.483
Pars_1234
TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: pai:PAE2562 adenylylsulfate reductase beta subunit part 2, authentic frameshift.
 
  
 0.456
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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