Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Pars_0752PFAM: transcriptional regulator PadR family protein; KEGG: pai:PAE1760 hypothetical protein. (100 aa)    
Predicted Functional Partners:
Pars_0753
PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH domain protein; KEGG: pai:PAE1761 myo-inositol-1-phosphate synthase.
     
 0.900
Pars_0751
TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: pai:PAE1759 molybdopterin-guanine dinucleotide biosynthesis protein B, conjectural.
       0.789
Pars_0800
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: pai:PAE2176 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.548
Pars_0749
Family 550 protein; KEGG: pai:PAE1755 P.aerophilum family 550 protein.
       0.439
Pars_0750
Family 66 protein; KEGG: pai:PAE1756 P.aerophilum family 66 protein.
       0.439
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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