STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pars_0911KEGG: pis:Pisl_0163 hypothetical protein. (203 aa)    
Predicted Functional Partners:
Pars_0910
PFAM: DsrC family protein; KEGG: pis:Pisl_0168 DsrC family protein.
       0.675
Pars_0912
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sso:SSO2629 oxidoreductase (flavoprotein).
       0.608
Pars_0913
Hypothetical protein.
       0.608
Pars_0907
KEGG: pis:Pisl_0171 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
       0.554
Pars_0908
KEGG: pis:Pisl_0170 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region.
       0.554
Pars_0909
KEGG: pis:Pisl_0169 hypothetical protein.
       0.554
Pars_0906
PFAM: Nitrate reductase, gamma subunit; KEGG: pis:Pisl_0172 nitrate reductase, gamma subunit.
       0.461
Pars_0914
KEGG: pis:Pisl_0175 hypothetical protein.
       0.450
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.