STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pars_1900KEGG: pai:PAE2256 hypothetical protein. (102 aa)    
Predicted Functional Partners:
Pars_1901
PFAM: Radical SAM domain protein; KEGG: pai:PAE2255 hypothetical protein.
       0.719
Pars_1902
KEGG: pai:PAE2254 hypothetical protein.
       0.530
Pars_1898
KEGG: pis:Pisl_0914 hypothetical protein.
       0.437
Pars_1899
Pullulanase; KEGG: pis:Pisl_0915 pullulanase.
       0.437
Pars_1897
KEGG: pis:Pisl_0913 LPXTG-motif cell wall anchor domain.
       0.422
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.