STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pars_1968Hypothetical protein; KEGG: pis:Pisl_0785 conserved hypothetical protein. (107 aa)    
Predicted Functional Partners:
Pars_1969
PFAM: glycosyl transferase, family 4; KEGG: pai:PAE3488 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase.
       0.795
Pars_1970
PFAM: deoxyhypusine synthase; KEGG: pai:PAE3487 deoxyhypusine synthase.
       0.792
Pars_1971
KEGG: pai:PAE3486 hypothetical protein.
       0.792
Pars_1966
Conserved hypothetical protein; KEGG: pai:PAE3494 conserved within P.aerophilum.
       0.777
Pars_1967
PFAM: Miro domain protein; KEGG: pai:PAE3492 conserved within P.aerophilum.
       0.777
rps15
PFAM: ribosomal protein S15; Ribosomal S13S15-like; KEGG: pai:PAE3485 ribosomal protein S13.
       0.563
Pars_1973
KEGG: pai:PAE3484 hypothetical protein.
       0.494
Pars_1974
KEGG: pai:PAE3482 hypothetical protein.
       0.494
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.