STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pars_2001Pantothenate synthetase; PFAM: Protein of unknown function DUF137; KEGG: pai:PAE3406 hypothetical protein. (257 aa)    
Predicted Functional Partners:
Pars_2002
Pantothenate kinase; KEGG: pai:PAE3407 hypothetical protein.
 
  
 0.983
Pars_0203
Phosphopantothenate-cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: pis:Pisl_1313 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase.
 
  
 0.951
Pars_0176
4-aminobutyrate aminotransferase apoenzyme; PFAM: aminotransferase class-III; KEGG: pis:Pisl_1743 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
  0.900
Pars_0404
KEGG: pis:Pisl_1381 aspartate 1-decarboxylase.
     
  0.900
Pars_1840
NMD3; PFAM: NMD3; KEGG: pai:PAE1653 hypothetical protein.
 
     0.664
tiaS
tRNA(Ile2) 2-agmatinylcytidine synthetase; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.
 
     0.593
Pars_2091
PFAM: TatD-related deoxyribonuclease; KEGG: pai:PAE2050 hypothetical protein.
 
     0.583
Pars_1985
PFAM: Protein of unknown function DUF54; KEGG: pai:PAE1632 conserved hypothetical protein; Belongs to the UPF0201 family.
 
   
 0.573
Pars_2000
PFAM: thioesterase superfamily protein; KEGG: pai:PAE3404 acyl coenzyme A thioester hydrolase.
       0.562
nusA
NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family.
 
     0.557
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.