Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pars_2018PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pai:PAE2077 hypothetical protein. (206 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
 
     0.594
Pars_2019
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pai:PAE2075 nitrilase, conjectural.
       0.575
nac
Nascent polypeptide associated complex NAC; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.
  
     0.493
Pars_0460
PFAM: protein of unknown function DUF6, transmembrane; KEGG: pai:PAE1372 hypothetical protein.
 
   
 0.447
Pars_1992
PFAM: glycosyl transferase, family 39; KEGG: pai:PAE1623 hypothetical protein.
  
     0.447
Pars_0848
PFAM: protein of unknown function DUF1646; KEGG: pai:PAE2769 hypothetical protein.
  
     0.443
Pars_1503
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: pai:PAE2082 branched-chain amino acid binding protein; TC 3.A.1.4.-.
 
 
 
 0.411
Pars_1318
KEGG: pis:Pisl_0347 conserved hypothetical protein.
  
     0.403
Pars_0667
PFAM: protein of unknown function DUF6, transmembrane; KEGG: pai:PAE1545 hypothetical protein.
 
   
 0.400
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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