STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pars_2069Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pai:PAE2001 glutamine transport ATP-binding; TC 3.A.1.3.-. (244 aa)    
Predicted Functional Partners:
Pars_2068
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pai:PAE2000 glutamine transport system permease protein, putative; TC 3.A.1.3.-.
 
 0.998
Pars_2011
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; KEGG: pai:PAE2096 bacterial extracellular solute-binding proteins, family 3; TC 3.A.1.3.-.
 
 
 0.906
Pars_1328
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; KEGG: pai:PAE2954 bacterial extracellular solute-binding proteins, family 3; TC 3.A.1.3.-.
 
 
 0.902
Pars_0969
PFAM: argininosuccinate synthase; KEGG: pai:PAE2884 argininosuccinate synthase.
  
  
 0.759
Pars_2070
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: pai:PAE2002 molybdopterin oxidoreductase.
     
 0.750
Pars_2072
Bis(5'nucleosyl)-tetraphosphatase, ApaH; PFAM: metallophosphoesterase; SMART: serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; KEGG: pai:PAE2004 serine/threonine specific protein phosphatase.
     
 0.716
Pars_2071
PFAM: TatD-related deoxyribonuclease; KEGG: pis:Pisl_1823 TatD-related deoxyribonuclease.
       0.669
argH
PFAM: fumarate lyase; KEGG: pai:PAE2887 argininosuccinate lyase.
 
  
 0.578
Pars_1098
PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; KEGG: pai:PAE3442 glutamine synthetase.
 
  
 0.533
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.521
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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