Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pars_2113PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pai:PAE1922 UDP-glucose 4-epimerase. (314 aa)    
Predicted Functional Partners:
Pars_0315
KEGG: pai:PAE1184 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: histidine triad (HIT) protein; galactose-1-phosphate uridyl transferase domain protein.
 
 
 0.928
Pars_0340
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pab:PAB2145 UDP-glucose 4-epimerase.
  
  
 
0.918
Pars_1620
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: pis:Pisl_0928 nucleotidyl transferase.
 
 0.915
rps19
SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.914
Pars_0080
PFAM: Nucleotidyl transferase; KEGG: pai:PAE0837 sugar-phosphate nucleotidyl transferase.
 
 0.911
rps3
SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
   
 0.910
rps3ae
PFAM: ribosomal protein S3Ae; KEGG: pai:PAE3472 ribosomal protein S3; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.909
rps12
SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.
   
 0.907
rps24e
PFAM: Ribosomal protein S24e; KEGG: pis:Pisl_1895 transcriptional regulator, fis family; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.904
rps28e
PFAM: Ribosomal protein S28e; KEGG: pai:PAE3344 ribosomal protein S28; Belongs to the eukaryotic ribosomal protein eS28 family.
   
 0.904
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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