Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pars_2164PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pai:PAE1841 hypothetical protein. (316 aa)    
Predicted Functional Partners:
Pars_2160
KEGG: pai:PAE0297 hypothetical protein.
 
     0.725
Pars_2012
D-proline dehydrogenase; PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pai:PAE2095 conserved within P.aerophilum.
 
 
 0.724
Pars_0669
PFAM: FAD dependent oxidoreductase; KEGG: pis:Pisl_1612 FAD dependent oxidoreductase.
 
 
 0.721
Pars_0135
KEGG: pai:PAE0934 hypothetical protein.
 
   
 0.616
Pars_1800
KEGG: pai:PAE3057 P.aerophilum family 417, putative ATP binding.
 
     0.611
Pars_1916
PFAM: von Willebrand factor, type A; VWA containing CoxE family protein; KEGG: pai:PAE2239 hypothetical protein.
  
     0.607
Pars_2161
PFAM: HEPN domain protein; KEGG: pai:PAE0168 hypothetical protein.
 
     0.597
Pars_2049
SMART: AAA ATPase; KEGG: pis:Pisl_1843 AAA ATPase.
 
     0.585
Pars_2158
PFAM: amidohydrolase; KEGG: pai:PAE0309 chlorohydrolase, conjectural.
 
    0.577
Pars_1950
SMART: helicase c2; KEGG: pai:PAE3526 hypothetical protein.
  
     0.569
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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