Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pars_2276PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: pis:Pisl_0327 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (132 aa)    
Predicted Functional Partners:
Pars_2272
PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; KEGG: pis:Pisl_0331 NADH dehydrogenase (ubiquinone); Belongs to the complex I 49 kDa subunit family.
 
 0.989
Pars_2273
KEGG: pis:Pisl_0330 NADH-quinone oxidoreductase, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Belongs to the complex I 20 kDa subunit family.
 
 0.987
Pars_2275
PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: pis:Pisl_0328 respiratory-chain NADH dehydrogenase, subunit 1.
 
 0.986
Pars_2120
PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; KEGG: pai:PAE1582 NADH-ubiquinone oxidoreductase subunit.
 
 0.984
Pars_1000
PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; KEGG: pai:PAE2926 NADH-ubiquinone oxidoreductase subunit.
  
 0.983
Pars_1001
KEGG: pis:Pisl_0336 NADH-quinone oxidoreductase, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Belongs to the complex I 20 kDa subunit family.
 
 0.980
Pars_2274
KEGG: pis:Pisl_0329 NADH-ubiquinone oxidoreductase subunit.
  
 0.979
Pars_2280
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: pis:Pisl_0323 NADH/ubiquinone/plastoquinone (complex I).
 
 0.975
Pars_0646
PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: pis:Pisl_1633 respiratory-chain NADH dehydrogenase, subunit 1.
 
 0.970
Pars_0648
PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: pai:PAE1578 NADH-ubiquinone oxidoreductase subunit.
  
 
 0.963
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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