STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cag_1153Conserved hypothetical protein. (131 aa)    
Predicted Functional Partners:
Cag_1594
Hypothetical protein.
  
     0.759
Cag_0393
Hydroxyneurosporene synthase.
  
     0.743
Cag_0189
Conserved hypothetical protein.
  
     0.742
Cag_1615
Conserved hypothetical protein.
  
     0.733
Cag_0405
Conserved hypothetical protein.
  
     0.720
Cag_0973
Transcriptional regulator, putative.
  
     0.720
Cag_0970
Conserved hypothetical protein.
  
     0.709
Cag_0610
Conserved hypothetical protein.
  
     0.675
Cag_1395
Anti-anti-sigma factor, putative.
  
     0.669
Cag_1682
Conserved hypothetical protein.
  
     0.650
Your Current Organism:
Chlorobium chlorochromatii
NCBI taxonomy Id: 340177
Other names: C. chlorochromatii CaD3, Chlorobium chlorochromatii CaD3, Chlorobium chlorochromatii str. CaD3, Chlorobium chlorochromatii strain CaD3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.