STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cag_1237ArgK protein. (336 aa)    
Predicted Functional Partners:
Cag_1222
Heterodimeric methylmalonyl-CoA mutase small subunit.
 
 0.999
Cag_1223
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
 0.999
Cag_1126
methylmalonyl-CoA epimerase.
  
 0.909
Cag_1238
Hypothetical protein.
       0.553
Cag_1521
propionyl-CoA carboxylase carboxyltransferase subunit.
 
   
 0.407
Your Current Organism:
Chlorobium chlorochromatii
NCBI taxonomy Id: 340177
Other names: C. chlorochromatii CaD3, Chlorobium chlorochromatii CaD3, Chlorobium chlorochromatii str. CaD3, Chlorobium chlorochromatii strain CaD3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.