Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cag_0207 | dnaJ | Cag_0207 | Cag_1422 | IscU protein. | Heat shock protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.432 |
Cag_0207 | dnaK | Cag_0207 | Cag_1893 | IscU protein. | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.893 |
Cag_1146 | Cag_1484 | Cag_1146 | Cag_1484 | Hypothetical protein. | ATPase; Belongs to the ClpA/ClpB family. | 0.585 |
Cag_1146 | Cag_1876 | Cag_1146 | Cag_1876 | Hypothetical protein. | ATPase; Belongs to the ClpA/ClpB family. | 0.585 |
Cag_1146 | Cag_1973 | Cag_1146 | Cag_1973 | Hypothetical protein. | ATPase. | 0.585 |
Cag_1146 | dnaK | Cag_1146 | Cag_1893 | Hypothetical protein. | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.964 |
Cag_1146 | groL | Cag_1146 | Cag_1306 | Hypothetical protein. | Chaperonin Cpn60/TCP-1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.681 |
Cag_1146 | grpE | Cag_1146 | Cag_1423 | Hypothetical protein. | Molecular chaperone GrpE (heat shock protein)-like protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the rea [...] | 0.783 |
Cag_1146 | hrcA | Cag_1146 | Cag_1424 | Hypothetical protein. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.667 |
Cag_1146 | htpG | Cag_1146 | Cag_1071 | Hypothetical protein. | ATP-binding region, ATPase-like protein; Molecular chaperone. Has ATPase activity. | 0.933 |
Cag_1484 | Cag_1146 | Cag_1484 | Cag_1146 | ATPase; Belongs to the ClpA/ClpB family. | Hypothetical protein. | 0.585 |
Cag_1484 | dnaJ | Cag_1484 | Cag_1422 | ATPase; Belongs to the ClpA/ClpB family. | Heat shock protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.661 |
Cag_1484 | dnaK | Cag_1484 | Cag_1893 | ATPase; Belongs to the ClpA/ClpB family. | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.867 |
Cag_1484 | groL | Cag_1484 | Cag_1306 | ATPase; Belongs to the ClpA/ClpB family. | Chaperonin Cpn60/TCP-1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.450 |
Cag_1484 | grpE | Cag_1484 | Cag_1423 | ATPase; Belongs to the ClpA/ClpB family. | Molecular chaperone GrpE (heat shock protein)-like protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the rea [...] | 0.715 |
Cag_1484 | hrcA | Cag_1484 | Cag_1424 | ATPase; Belongs to the ClpA/ClpB family. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.406 |
Cag_1484 | htpG | Cag_1484 | Cag_1071 | ATPase; Belongs to the ClpA/ClpB family. | ATP-binding region, ATPase-like protein; Molecular chaperone. Has ATPase activity. | 0.585 |
Cag_1876 | Cag_1146 | Cag_1876 | Cag_1146 | ATPase; Belongs to the ClpA/ClpB family. | Hypothetical protein. | 0.585 |
Cag_1876 | Cag_1973 | Cag_1876 | Cag_1973 | ATPase; Belongs to the ClpA/ClpB family. | ATPase. | 0.976 |
Cag_1876 | dnaJ | Cag_1876 | Cag_1422 | ATPase; Belongs to the ClpA/ClpB family. | Heat shock protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.661 |
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