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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pckGPhosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. (630 aa)    
Predicted Functional Partners:
Cag_1730
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
 
 0.992
Cag_0366
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
   
 
 0.945
Cag_0859
Oxaloacetate decarboxylase, alpha subunit.
     
 0.934
Cag_0797
ATP citrate lyase subunit 2.
   
 
 0.933
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
    
 0.917
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
     
 0.914
Cag_0155
Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
     
 0.913
Cag_0317
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.912
Cag_0796
ATP citrate lyase subunit 1.
   
 
 0.911
Cag_0365
2-oxoglutarate ferredoxin oxidoreductase, beta subunit.
   
 
 0.837
Your Current Organism:
Chlorobium chlorochromatii
NCBI taxonomy Id: 340177
Other names: C. chlorochromatii CaD3, Chlorobium chlorochromatii CaD3, Chlorobium chlorochromatii str. CaD3, Chlorobium chlorochromatii strain CaD3
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