Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIP92199.1 | SIP93308.1 | SAMN05421829_101331 | SAMN05421829_101369 | LysR substrate binding domain-containing protein. | Integrating conjugative element relaxase, PFL_4751 family. | 0.736 |
SIP92199.1 | SIP93583.1 | SAMN05421829_101331 | SAMN05421829_101380 | LysR substrate binding domain-containing protein. | Protein-disulfide isomerase. | 0.545 |
SIP92199.1 | SIP93609.1 | SAMN05421829_101331 | SAMN05421829_101381 | LysR substrate binding domain-containing protein. | Conjugative transfer ATPase, PFL_4706 family. | 0.710 |
SIP92199.1 | SIP94162.1 | SAMN05421829_101331 | SAMN05421829_101400 | LysR substrate binding domain-containing protein. | Conjugative coupling factor TraD, TOL family. | 0.681 |
SIP92199.1 | SIP94223.1 | SAMN05421829_101331 | SAMN05421829_101402 | LysR substrate binding domain-containing protein. | Transglycosylase SLT domain-containing protein. | 0.579 |
SIP92199.1 | SIP94332.1 | SAMN05421829_101331 | SAMN05421829_101406 | LysR substrate binding domain-containing protein. | Helicase conserved C-terminal domain-containing protein. | 0.708 |
SIP92199.1 | SIP94411.1 | SAMN05421829_101331 | SAMN05421829_101409 | LysR substrate binding domain-containing protein. | Hypothetical protein. | 0.715 |
SIP92199.1 | SIP94972.1 | SAMN05421829_101331 | SAMN05421829_101434 | LysR substrate binding domain-containing protein. | Chromosome partitioning related protein ParA. | 0.601 |
SIP93308.1 | SIP92199.1 | SAMN05421829_101369 | SAMN05421829_101331 | Integrating conjugative element relaxase, PFL_4751 family. | LysR substrate binding domain-containing protein. | 0.736 |
SIP93308.1 | SIP93583.1 | SAMN05421829_101369 | SAMN05421829_101380 | Integrating conjugative element relaxase, PFL_4751 family. | Protein-disulfide isomerase. | 0.786 |
SIP93308.1 | SIP93609.1 | SAMN05421829_101369 | SAMN05421829_101381 | Integrating conjugative element relaxase, PFL_4751 family. | Conjugative transfer ATPase, PFL_4706 family. | 0.796 |
SIP93308.1 | SIP94162.1 | SAMN05421829_101369 | SAMN05421829_101400 | Integrating conjugative element relaxase, PFL_4751 family. | Conjugative coupling factor TraD, TOL family. | 0.827 |
SIP93308.1 | SIP94223.1 | SAMN05421829_101369 | SAMN05421829_101402 | Integrating conjugative element relaxase, PFL_4751 family. | Transglycosylase SLT domain-containing protein. | 0.774 |
SIP93308.1 | SIP94332.1 | SAMN05421829_101369 | SAMN05421829_101406 | Integrating conjugative element relaxase, PFL_4751 family. | Helicase conserved C-terminal domain-containing protein. | 0.790 |
SIP93308.1 | SIP94384.1 | SAMN05421829_101369 | SAMN05421829_101408 | Integrating conjugative element relaxase, PFL_4751 family. | Hypothetical protein. | 0.475 |
SIP93308.1 | SIP94411.1 | SAMN05421829_101369 | SAMN05421829_101409 | Integrating conjugative element relaxase, PFL_4751 family. | Hypothetical protein. | 0.771 |
SIP93308.1 | SIP94672.1 | SAMN05421829_101369 | SAMN05421829_101423 | Integrating conjugative element relaxase, PFL_4751 family. | DNA topoisomerase-3. | 0.821 |
SIP93308.1 | SIP94972.1 | SAMN05421829_101369 | SAMN05421829_101434 | Integrating conjugative element relaxase, PFL_4751 family. | Chromosome partitioning related protein ParA. | 0.786 |
SIP93583.1 | SIP92199.1 | SAMN05421829_101380 | SAMN05421829_101331 | Protein-disulfide isomerase. | LysR substrate binding domain-containing protein. | 0.545 |
SIP93583.1 | SIP93308.1 | SAMN05421829_101380 | SAMN05421829_101369 | Protein-disulfide isomerase. | Integrating conjugative element relaxase, PFL_4751 family. | 0.786 |
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